Insertion junction: CLIP2.043951_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043951
Chromosome:chromosome 16
Location:7633524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684939 (1 of 4) PTHR11207//PTHR11207:SF0 - RIBONUCLEASE III // RIBONUCLEASE 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGGGGCAGGACCAAGCACTACTTCAAGGTGGGGATGAGGGTGTGAG
Internal bar code:CGAACACTTCTCTTTATAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3977
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCAAGCGGACAGAATGC
Suggested primer 2:TGATGTCGCTTCTGTGCCTT