Insertion junction: CLIP2.043953_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043953
Chromosome:chromosome 17
Location:2648655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716800 XUV7 Xanthine/uracil/vitamin C permease-like, sodium-dependent CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGTGCGAGGACTCGACCGCGATCCGCCGCCTGGCAGCACCAGCCCCG
Internal bar code:CCTTTGGCGGTACCATGGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGTTGTGCTGCTTTGA
Suggested primer 2:ACACATCAACAACCGCAACG