Insertion junction: CLIP2.043955_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043955
Chromosome:chromosome 1
Location:4634810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032000 (1 of 19) IPR000225//IPR016024 - Armadillo // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACTGTGCACATGCGGTCTTGATGGCACCCATGTGCGGCCGTCAGGTA
Internal bar code:CAGGGCCAGTCTTTGCATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3892
LEAP-Seq percent confirming:89.5522
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AAGATGCAGGAAAGCCCTCC
Suggested primer 2:GCCATTCCTAGCATCGTCGA