Insertion junction: CLIP2.043959_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043959
Chromosome:chromosome 3
Location:3066523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163950 CDO2 (1 of 2) 1.13.11.20 - Cysteine dioxygenase; Cysteine dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAACACACGTCGGCATCCACGTTCGCGCGAGCCCGCTCGGCCAGCTC
Internal bar code:AGGTGATACGTTTGGTTTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:701
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTATGCAACCTGCCTC
Suggested primer 2:TACAACCCGTGCGCACTTAT