Insertion junction: CLIP2.043969_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043969
Chromosome:chromosome 12
Location:4659017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522300 (1 of 1) IPR001611//IPR002048//IPR003590//IPR008907//IPR011992 - Leucine-rich repeat // EF-hand domain // Leucine-rich repeat, ribonuclease inhibitor subtype // P25-alpha // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACCAAACCATGCGCCGCTTCACAGTCGTATGATGTTCAGCCCCCTA
Internal bar code:GGTCACCGAACGAAGTTAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:885
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTAGGAGGGGAAGAGCA
Suggested primer 2:TGCAGGGTGGTGTTCTTGTT