Insertion junction: CLIP2.043973_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043973
Chromosome:chromosome 6
Location:4756330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279550 (1 of 62) PF00226 - DnaJ domain (DnaJ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCATGCACACGGCAAACTGGTGGTGATTGGCCTGCAGCATCGCCTGCA
Internal bar code:ATAAGATTTTCTGCGTAGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1140
LEAP-Seq percent confirming:65.625
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCGGCCCTCAACTTCTTG
Suggested primer 2:GGCACTGCGCTTGATTGAAA