Insertion junction: CLIP2.043977_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043977
Chromosome:chromosome 16
Location:5083035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685650 GLR1 Ionotropic glutamate receptor; (1 of 4) PF00060//PF00497 - Ligand-gated ion channel (Lig_chan) // Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGACAGGACCATACATACGTACCGCACAAGCAGCGCGCGCGGGTCC
Internal bar code:GTAGGCAGGACTGTAGAAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:260
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTTTGCAGCATCACACA
Suggested primer 2:ATGTTTGTCACTTGTGCCGC