Insertion junction: CLIP2.043980_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043980
Chromosome:chromosome 1
Location:550943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003463 (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCTGTCAGGCACCTACGGTCCACAGTCCCGTCATATCCGAGCCTACG
Internal bar code:TTATGTCAGTATCTCGATCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGGAAACGAAAGCCCGC
Suggested primer 2:TGGATCACATAGGCCCAGGA