Insertion junction: CLIP2.043983_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043983
Chromosome:chromosome 5
Location:2629857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239978 (1 of 1) PTHR36116//PTHR36116:SF1 - FAMILY NOT NAMED // UPF0060 MEMBRANE PROTEIN YNFA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAAATTGTCTAGCAGCGGGTTTGGGGTTTCGCGCCGGTTCATGATAT
Internal bar code:CGTCAGATTCGACTAGATGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1612
LEAP-Seq percent confirming:96.6102
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TACATCCGACCCCACTAGCA
Suggested primer 2:CGCCTCAACTTGGACTAGGG