Insertion junction: CLIP2.043986_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043986
Chromosome:chromosome 16
Location:6242873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676400 HEL63 (1 of 1) K12811 - ATP-dependent RNA helicase DDX46/PRP5 (DDX46, PRP5); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAAGGCCGACCCACACGCACCTTGACCAGGCCGGCCTTGTGCTTGGTG
Internal bar code:TCTAACTCTCAGTAACAGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2110
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGGTGGTGAACTACGA
Suggested primer 2:GGATGTCGTCCTGTGTGTGT