Insertion junction: CLIP2.043991_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043991
Chromosome:chromosome 3
Location:6643768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195050 (1 of 1) PTHR11732//PTHR11732:SF263 - ALDO/KETO REDUCTASE // SUBFAMILY NOT NAMED outside_mRNA
Cre03.g800368 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTCACGGGAGGGCTATCGGAGTAGGGCTGAGGATGGCGCGTGTCAG
Internal bar code:TGGTTCCCCCCAACGCGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3619
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACCTTCGCAGTTCCCTC
Suggested primer 2:CGGCTGTCCTTTGAGGCTTA