Insertion junction: CLIP2.044000_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044000
Chromosome:chromosome 2
Location:2773018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094050 PIGO1,PIGO,PIG-O (1 of 1) K05288 - phosphatidylinositol glycan, class O (PIGO); Ethanolamine transferase at GPI Mannose III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCATGAGGGCCTGCAACACCTTAGTGCGACCACCGCCCCGTGGCGT
Internal bar code:TCGAACACTGTCACCCCGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTACGAGGACACGGTTGG
Suggested primer 2:ACATCAACTGCTGACCGAGG