Insertion junction: CLIP2.044000_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044000
Chromosome:chromosome 2
Location:2773021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094050 PIGO1,PIGO,PIG-O (1 of 1) K05288 - phosphatidylinositol glycan, class O (PIGO); Ethanolamine transferase at GPI Mannose III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGGAGACCCCAAACGGTGCCTTGATTATTACCGAAATTACACACAGG
Internal bar code:TCGAACACTGTCACCCCGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCAACTGCTGACCGAGG
Suggested primer 2:TGTTACGAGGACACGGTTGG