Insertion junction: CLIP2.044003_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044003
Chromosome:chromosome 8
Location:3578509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379500 (1 of 1) IPR000719//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGACTGTCCGCACATTTCGCCAAGTTAGTCCACAGGTCGTTGCTCCG
Internal bar code:GTGATCTTTCCAGGGGAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4688
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGCGCGTCAATAAACTG
Suggested primer 2:TTCGCTGGAGACATGTGGAC