Insertion junction: CLIP2.044017_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044017
Chromosome:chromosome 13
Location:4659351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603950 CYN50,CYN14 Cyclophilin 50; (1 of 2) IPR002130//IPR029000 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain // Cyclophilin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCAAGATCGACGACATGAGTCTGCTGGATGCGATCGTGAAGCTGCCC
Internal bar code:TGTGTGGTTAAGTTTCCGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1057
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTGTCGCACACTTGTC
Suggested primer 2:GGGGCGGGTTGTAAATACCA