Insertion junction: CLIP2.044018_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044018
Chromosome:chromosome 4
Location:200676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217050 (1 of 173) IPR013083 - Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGTGTGGCATCACGGCATCGCAACACCACCACCCTCCATGCAGCCA
Internal bar code:ATTTTCTAGTTTGTGTTGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:526
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTGTTTTGCTCAACAGG
Suggested primer 2:TTCCGGGTATGATACGCTGC