Insertion junction: CLIP2.044021_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044021
Chromosome:chromosome 17
Location:2829784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718468 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTTGATCCAGTTGTTGGTGGTGAAGTTGGCAGCGGTGAGGTTGCCCC
Internal bar code:GAATCGACCCTGGCCAACAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3480
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTACGTTTTGCCCCCTGG
Suggested primer 2:GTCACCCGTATGCCGTCTAG