Insertion junction: CLIP2.044021_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044021
Chromosome:chromosome 17
Location:2829793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718468 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCCAGGGCACCCGCGATGACAACATGATCGTGGTCAACGTGGGCGC
Internal bar code:GAATCGACCCTGGCCAACAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:996
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACCCGTATGCCGTCTAG
Suggested primer 2:ATCTACGTTTTGCCCCCTGG