Insertion junction: CLIP2.044050_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044050
Chromosome:chromosome 2
Location:48344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g073200 THD1 putative threonine dehydratase and component psaA trans-splicing sub complex II; (1 of 1) K01754 - threonine dehydratase (E4.3.1.19, ilvA, tdcB) 5'UTR
Cre02.g073250 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAATACTCTGCGCGGATGCAACGTGGAGCGGACTGAATTTCAGATACC
Internal bar code:TGCTTATAAGTCATGTGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4012
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTCTGACGAAGGGGCTG
Suggested primer 2:GGACGGGCCAAACTTACTGA