Insertion junction: CLIP2.044056_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044056
Chromosome:chromosome 3
Location:1862422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154600 (1 of 2) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCCCCAACGCGCCACGATTGGCTGGCGCGCGCGCTTGTCGACGGA
Internal bar code:CTAGGACGTAGTAGAACACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1416
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGTGGAATGTGATGTCG
Suggested primer 2:TGTGCTTGTGTCGTGTCGTA