Insertion junction: CLIP2.044056_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044056
Chromosome:chromosome 3
Location:1862426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154600 (1 of 2) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATCGGCGCTGGCGGTACTCGGCGGTGCTGCGGTGGCGCCAGGTGGCG
Internal bar code:CCTATGGTCAGTCGGAATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:826
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTGTGTCGTGTCGTA
Suggested primer 2:TGGGGTGGAATGTGATGTCG