Insertion junction: CLIP2.044075_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044075
Chromosome:chromosome 13
Location:3589812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGCTACTCACCCCTTCACTTTTAAACCATCTTGAGTGCAATTCCCCC
Internal bar code:TGACTACAATAATACATTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2204
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCGCACCCTTCAATCCT
Suggested primer 2:TGTGTTAAGGAGCCGCACAT