Insertion junction: CLIP2.044076_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044076
Chromosome:chromosome 8
Location:1170045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363100 (1 of 2) PTHR23301//PTHR23301:SF0 - CHITIN BINDING PERITROPHIN-A // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGCGTCGTCGCCCCAGCCGGACGGGCAGTTCTTGTAGCAGCGGGTGG
Internal bar code:TACGCGGCAATTCTTCGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2126
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCGGACAATCAAGTCT
Suggested primer 2:GAAATAGACGCAGCAGCAGC