Insertion junction: CLIP2.044076_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044076
Chromosome:chromosome 8
Location:1170100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363100 (1 of 2) PTHR23301//PTHR23301:SF0 - CHITIN BINDING PERITROPHIN-A // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGTGCTACCCGCAGTGCCGCTCCGGCTACACCTCCAACAAGCTCACC
Internal bar code:TACGCGGCAATTCTTCGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:784
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATAGACGCAGCAGCAGC
Suggested primer 2:CCCAGCGGACAATCAAGTCT