Insertion junction: CLIP2.044077_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044077
Chromosome:chromosome 1
Location:5746641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041150 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCATGTTGCCGACTCACTGCCTGACAAATGCCAGCAGGCGTCACCC
Internal bar code:ATTCAGGCAAACGGGATCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3976
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTATGCCACTGAACCT
Suggested primer 2:TTGGCTTGCCGTTTGCTTAC