Insertion junction: CLIP2.044079_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044079
Chromosome:chromosome 7
Location:3866317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339000 CrRbcXIIb,RBCX2B RuBisCO chaperone; (1 of 2) PTHR33791//PTHR33791:SF1 - FAMILY NOT NAMED // CHAPERONIN-LIKE RBCX PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTGTTCCACGCCCGTGCACGCGCAACTTGACGGTAAGAAGCACTCAT
Internal bar code:AGAGGGTAGGGCCTTCCGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCGACAGTTGCATAATG
Suggested primer 2:GGAAACGCAACCCAGAAACC