Insertion junction: CLIP2.044087_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044087
Chromosome:chromosome 3
Location:809250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146267 (1 of 2) IPR000571//IPR002110//IPR020683 - Zinc finger, CCCH-type // Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGCCCCAGCTGCTCCTAACACGCCCTAGCAGCTCTGCAGCGCGCCGC
Internal bar code:AGTTGGTCTGGGTGCAAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCAGCTCCTCAATGCA
Suggested primer 2:TAAGTCACGTGTCCACAGGC