Insertion junction: CLIP2.044091_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044091
Chromosome:chromosome 7
Location:4836186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346100 (1 of 1) 3.1.21.7 - Deoxyribonuclease V / Escherichia coli endodeoxyribonuclease V intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCATCTTCCGCTCTCCGCAACGCTGCCATTAGCATTTTTCGTTTGCG
Internal bar code:GACGAGATGCAATGGCACCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1262
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TATTCATAACGCCCCGCCTC
Suggested primer 2:AACGCCGACTTTGTCAAACG