Insertion junction: CLIP2.044094_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044094
Chromosome:chromosome 7
Location:5684262
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g352800 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTCAATGGTGGAGGCACGTGTGGGCCGGCTGCGTGGCGGCGGGAAAC
Internal bar code:ATCTTTTTTCATAGCGCCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:470
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACACAGATGAGCACACC
Suggested primer 2:AGAGCTGCTGTCGTAGGAGA