Insertion junction: CLIP2.044097_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044097
Chromosome:chromosome 4
Location:1472467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213950 SRR23 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCTCCTTCATCTCTGGCGCCGGGCGCCGTCTGTTCCGCCGAGCGTTG
Internal bar code:ATCCATGTCCCAGCGCTATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3094
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTACAACAGCTCCGTCT
Suggested primer 2:TCGGTTACAAGTTTCCGGGG