Insertion junction: CLIP2.044107_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044107
Chromosome:chromosome 17
Location:5771752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741150 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCACGCACCTGCGTGGACACCGTAGCGCCGAGGCTGTTGGTCAGCA
Internal bar code:CTCGGTTTACCGGACGCAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1641
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGACGAGTAGGGTATGC
Suggested primer 2:AGGCGACACCCAGATTGAAG