Insertion junction: CLIP2.044108_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044108
Chromosome:chromosome 7
Location:2538143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329850 SNRK2P,KCN5 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; snRK1 family in Chlamydomonas, subgroup 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCAGCCACTCCACGGCGGCAGCGGCGGCGCCGCCGCCGCTGGTGCC
Internal bar code:GTCGTGAGGTCGTAAACCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CATCATCCTGGCACCGCTAT
Suggested primer 2:GTGTGTCTGGGGGAACTCTG