Insertion junction: CLIP2.044115_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044115
Chromosome:chromosome 6
Location:3413912
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278095 (1 of 1) IPR016024//IPR027417 - Armadillo-type fold // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCATGAATGCAACCGTCACCATATGAGCAATGTGGGTTTGTACGGC
Internal bar code:TACGCACGAGCTCGCGTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGTGTCTTCTTCTGCTT
Suggested primer 2:AGCCTGAGTATGGACGAGGT