Insertion junction: CLIP2.044121_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044121
Chromosome:chromosome 1
Location:3129122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019950 DNJ7 (1 of 1) PTHR24078:SF294 - DNAJ PROTEIN HOMOLOG 1; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTCTCTCTCCTCTCACTCTTCCTACCCATAACGCTTGCCTGACGTTC
Internal bar code:CTCCGCACCACACGATAATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCATAGCGCTAGTCTCA
Suggested primer 2:AAGCGCCAAATCTACGACCA