Insertion junction: CLIP2.044145_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044145
Chromosome:chromosome 10
Location:3896017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446450 (1 of 1) PTHR26402:SF316 - TRANSCRIPTIONAL REGULATORY PROTEIN CUSR intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGGTATGACGATCACGCTGGCCCTGCTGTCATGTGCAGCACTGCAT
Internal bar code:GGCGTATCGCGTAATTTCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3830
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACAATCTCCTCCGCACC
Suggested primer 2:TTCCTGACCTCAACTCGTGC