Insertion junction: CLIP2.044147_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044147
Chromosome:chromosome 9
Location:6779233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417400 (1 of 1) PF00628//PF05970 - PHD-finger (PHD) // PIF1-like helicase (PIF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACGATGAGGTTGATGCCGCCGAACGGCCAGTGCTCGGGCGTGCCCA
Internal bar code:TCATACGTCCCGCTACCTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3106
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGCTGGTCACGGAGATG
Suggested primer 2:TGTCGTACAGAAGAACGCCC