Insertion junction: CLIP2.044147_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044147
Chromosome:chromosome 9
Location:6779238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417400 (1 of 1) PF00628//PF05970 - PHD-finger (PHD) // PIF1-like helicase (PIF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGGTGATTTCTACCAGGTGAGCGCGGGCCTGGGCGGCACCCTCCGC
Internal bar code:TCATACGTCCCGCTACCTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTACAGAAGAACGCCC
Suggested primer 2:TCAAGCTGGTCACGGAGATG