Insertion junction: CLIP2.044156_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044156
Chromosome:chromosome 6
Location:564709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g253755 OTU2a,MT0618,155027 (1 of 1) IPR003323//IPR003903//IPR019400 - OTU domain // Ubiquitin interacting motif // Peptidase C65, otubain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATTCATGGATACACAGTCTAGCGTGCGCGACGATCGGCAGGCGCGC
Internal bar code:TGATTGTTTTGCTAGAGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4744
LEAP-Seq percent confirming:83.6364
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCGACAAAGAACACAAC
Suggested primer 2:ATCCTCCTGTCTCACCCTCC