Insertion junction: CLIP2.044167_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044167
Chromosome:chromosome 7
Location:3748035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338200 (1 of 2) K17579 - protein phosphatase 1 regulatory subunit 42 (PPP1R42, LRRC67) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTAGAAACGGCGCGGGCGGTTGCTGCACCCGCCAGTCATCCGGTGCGC
Internal bar code:GTGTTCGCTAGTTTGGGTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1733
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AATGAGTGTGCTGCGACTGA
Suggested primer 2:GGAGCTCAAGGAGGAGGAGA