Insertion junction: CLIP2.044167_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044167
Chromosome:chromosome 11
Location:3096480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475150 Similar to PKD2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCTGCCTGTCCCTCCTCACCCCTTGGCGCCCCCCTTCACAGCTTGCA
Internal bar code:GGCACTAGAGTCCGGTTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAACGCCAAGTGGAACC
Suggested primer 2:CACACGTCCCGTTTCCACTA