Insertion junction: CLIP2.044169_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044169
Chromosome:chromosome 9
Location:972694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGGAAACTGACCCACCACCCACCACCGAGTCCCATGCTGCACAACA
Internal bar code:ATCAGTATGCTACTGAAACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CATACAACCCGATCCTCCCG
Suggested primer 2:GCGATCAGTAGGGCATGTCA