Insertion junction: CLIP2.044170_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044170
Chromosome:chromosome 9
Location:3012150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393580 (1 of 2) PF03097 - BRO1-like domain (BRO1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCGAGGCCGCGGCGGGCAGTAGGGGCAGGGGGGGGGGGGTGCCGAG
Internal bar code:CTAATGTGCGGGACGATTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTGCATAGCTACGGCAC
Suggested primer 2:CACAGGCTGCTGTGTCTACA