Insertion junction: CLIP2.044177_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044177
Chromosome:chromosome 12
Location:8894186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545950 MAPKKK9 (1 of 19) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain; Mitogen-Activated Protein Kinase Kinase Kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCTACAACAGGACGGCATGCGTGCTAAGCTGCAAACCCCCCACACCG
Internal bar code:AGGATGCGAAAGGTGCATTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGGGGAAAGTACATCA
Suggested primer 2:CAGGCATATCAGTCCCGACC