Insertion junction: CLIP2.044181_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044181
Chromosome:chromosome 14
Location:42484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g608150 (1 of 1) PTHR32387:SF0 - NO VEIN-LIKE PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACGTATGCAACTTACAGCCGTTTGACCCTGTTATCAAAATGGCGTCA
Internal bar code:AGGTGGTGCCAAAGTAATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGGTCTGGTGCTCACA
Suggested primer 2:GCATTTTGTGAGGGTGGCTG