Insertion junction: CLIP2.044200_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044200
Chromosome:chromosome 3
Location:2311928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157900 (1 of 1) PTHR18937//PTHR18937:SF162 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACTGCCATAAGATGCACATTCCGGAAATTCGTCTCTGCTGGAACATGC
Internal bar code:TGGAATTAACTGTGTAAGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4001
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACACGTTGCAGTGCAGC
Suggested primer 2:GCATTGCATAGAAGGGCACG