Insertion junction: CLIP2.044201_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044201
Chromosome:chromosome 3
Location:4802730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178014 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGGCCACAGGTGCCCCTTGAGCGGTGATGGTTCCCGCAGCGGGCAC
Internal bar code:TGCGATTTATGTAGCGTTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTTTGCCACAACCTCGGG
Suggested primer 2:AGTGAGGAAGGTAGGGCGAT