Insertion junction: CLIP2.044207_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044207
Chromosome:chromosome 13
Location:1984377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576600 Conserved Protein with Similarity to Catalytic domain of Protein Tyrosine Kinases; (1 of 1) PTHR23257//PTHR23257:SF405 - SERINE-THREONINE PROTEIN KINASE // MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTTGCAGCCGCCGCCACTGCCACTGCACAGCGCTTCCACATGGACTG
Internal bar code:ACATATGGTTACTATCTTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:984
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATGTTGGGGTGGCTGAG
Suggested primer 2:TAGCGTGGGTGAGTTTGCAT