Insertion junction: CLIP2.044214_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044214
Chromosome:chromosome 3
Location:9128200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200655 DEG4 (1 of 1) 3.2.1.55 - Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase; DegP protease and Glycoside hydrolase family 3 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGGGGCGGGGAGATACGGGGGGAAGAGGGAGGGGGAGAGGCGGACA
Internal bar code:CAAACATTTTCTCCTCGTACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:185
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGCCACCTGTGCATCTT
Suggested primer 2:CACCACGTCTACCTCCACAC