Insertion junction: CLIP2.044219_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044219
Chromosome:chromosome 1
Location:2733814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016542 (1 of 1) IPR000104//IPR029063 - Antifreeze protein, type I // S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCGGCGCATGCACAGTCGTGGCGGGGTGCCGTGTTCTTGTTTGCTGG
Internal bar code:TTCTGAGTCGGCGCGCACTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2814
LEAP-Seq percent confirming:70.7317
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CAATATTTGCGGCTGGGCTC
Suggested primer 2:GGATGGTAGGCACACACACA