Insertion junction: CLIP2.044228_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044228
Chromosome:chromosome 6
Location:8070426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305250 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCCTTGGCCGCGCAGGGCGTATGGTATGGTATGCTGATCCACAAAA
Internal bar code:AGTTAAGTGTGGGATAACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3549
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCAAGAAGGTGTGTTGG
Suggested primer 2:GTAGCGTGTCCGAAAGTGGA